Theses and Dissertations

Date of Award

5-1-2026

Document Type

Thesis

Degree Name

Master of Science (MS)

Department

Chemistry

First Advisor

Evangelia Kotsikorou

Second Advisor

Frank B. Dean

Third Advisor

Jose J. Gutierrez

Abstract

One of DDT’s metabolites, p,p’-dichlorodiphenyldichloroethylene (DDE), has been classified as an endocrine disrupting chemical (EDC) due to its ability to interfere with hormone signaling by binding to nuclear receptors (NR) such as the androgen receptor (AR).

Structurally, the AR contains a ligand-binding domain (LBD) where endogenous steroids bind. Furthermore, the LBD contains a surface binding site known as binding function-3 (BF-3), which studies suggest exerts an allosteric effect on bound DHT when small, hydrophobic molecules bind.

Here, we present a study that examines how specific BF-3 site mutations and DDE binding affect steroid stability within the LBP utilizing computational methods. Comparative structural, dynamic, and binding free energy analyses were performed to evaluate how both BF-3 mutations and DDE binding influence receptor behavior. The results show that BF-3 mutation and DDE-induced inhibition may be explained by changes in orthosteric pocket geometry and DHT binding affinity.

Comments

Copyright © 2026 Emanuel Aggeo Flores. All Rights Reserved. https://proquest.com/docview/3371254563

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