Computer Science Faculty Publications and Presentations
Explore our Open Access Publications to discover research freely available to the public.
You can also view All Research Publications by the department, including both open access and subscription-based work over the past 36 months.
Submissions from 2021
Fast reconfiguration of robot swarms with uniform control signals, David Caballero, Angel A. Cantu, Timothy Gomez, Austin Luchsinger, Robert Schweller, and Tim Wylie
Covert Computation in Staged Self-Assembly: Verification Is PSPACE-Complete, David Caballero, Timothy Gomez, Robert Schweller, and Tim Wylie
On the effects of hierarchical self-assembly for reducing program-size complexity, Sarah Cannon, Erik D. Demaine, Martin L. Demaine, Sarah Eisenstat, David Furcy, Matthew J. Patitz, Robert Schweller, Scott M. Summers, and Andrew Winslow
Covert Computation in Self-Assembled Circuits, Angel A. Cantu, Austin Luchsinger, Robert Schweller, and Tim Wylie
Trustworthy Medical Segmentation with Uncertainty Estimation, Giuseppina Carannante, Dimah Dera, Nidhal C. Bouaynaya, Rasool Ghulam, and Hassan M. Fathallah-Shaykh
A Game Theoretical Analysis of Non-Linear Blockchain System, Lin Chen, Lei Xu, Zhimin Gao, Ahmed Sunny, Keshav Kasichainula, and Weidong Shi
Sentiment Analysis of Long-term Social Data during the COVID-19 Pandemic, Sophanna Ek, Marco Curci, Xiaokun Yang, Beiyu Lin, Pinchao Liu, and Hailu Xu
Optimal relay selection for UAV-assisted V2V communications, Xiying Fan, Di Liu, Bin Fu, and Shaojie Wen
Deciphering the Role of Ion Channels in Early Defense Signaling against Herbivorous Insects, Akanksha Gandhi, Rupesh R. Kariyat, Amaravadhi Harikishore, Marzieh Ayati, Anirban Bhunia, and Nirakar Sahoo
UAV-assisted data dissemination based on network coding in vehicular networks, Shidong Huang, Chuanhe Huang, Yabo Yin, Dongfang Wu, M. Wasim Abbas Ashraf, and Bin Fu
EDSC: An Event-Driven Smart Contract Platform, Mudabbir Kaleem, Keshav Kasichainula, Rabimba Karanjai, Lei Xu, Zhimin Gao, Lin Chen, and Weidong Shi
On Conditional Cryptocurrency With Privacy, Rabimba Karanjai, Lei Xu, Zhimin Gao, Lin Chen, Mudabbir Kaleem, and Weidong Shi
A Secure and Flexible FPGA–based Blockchain System for IIoTs, Han-Yee Kim, Lei Xu, Weidong Shi, and Taeweon Suh
Security and Reliability of Safety-Critical RTOS, Ryan Luna and Sheikh Ariful Islam
Improving the Success of Non-Traditional Students in an Introductory Computing Course, Christine F. Reilly, Laura M. Grabowski, and Gustavo Dietrich
Towards Accurate Run-Time Hardware-Assisted Stealthy Malware Detection: A Lightweight, yet Effective Time Series CNN-Based Approach, Hossein Sayadi, Yifeng Gao, Hosein Mohammadi Makrani, Jessica Lin, Paulo Cesar Costa, Setareh Rafatirad, and Houman Homayoun
Reshaping the Landscape of the Future: Software-Defined Manufacturing, Lei Xu, Lin Chen, Zhimin Gao, Hiram Moya, and Weidong Shi
Multi-Actor-Attention-Critic Reinforcement Learning for Central Place Foraging Swarms, Ning Yang, Qi Lu, Kele Xu, Bo Ding, and Zijian Gao
Robust inference of kinase activity using functional networks, Serhan Yılmaz, Marzieh Ayati, Daniela Schlatzer, A. Ercüment Çiçek, Mark A. Chance, and Mehmet Koyutürk
Submissions from 2020
Hierarchical Shape Construction and Complexity for Slidable Polyominoes under Uniform External Forces, Jose Balanza-Martinez, David Caballero, Angel A. Cantu, Mauricio Flores, Timothy Gomez, Austin Luchsinger, Rene Reyes, Robert Schweller, and Tim Wylie
Building Patterned Shapes in Robot Swarms with Uniform Control Signals, David Caballero, Angel A. Cantu, Timothy Gomez, Austin Luchsinger, Robert Schweller, and Tim Wylie
Hardness of Reconfiguring Robot Swarms with Uniform External Control in Limited Directions, David Caballero, Angel A. Cantu, Timothy Gomez, Austin Luchsinger, Robert Schweller, and Tim Wylie
Relocating Units in Robot Swarms with Uniform Control Signals is PSPACE-Complete, David Caballero, Angel A. Cantu, Timothy Gomez, Austin Luchsinger, Robert Schweller, and Tim Wylie
Signal Passing Self-Assembly Simulates Tile Automata, Angel A. Cantu, Austin Luchsinger, Robert Schweller, and Tim Wylie
New Bounds on Augmenting Steps of Block-Structured Integer Programs, Lin Chen, Martin Koutecký, Lei Xu, and Weidong Shi
Computational Complexity Characterization of Protecting Elections from Bribery, Lin Chen, Ahmed Sunny, Lei Xu, Shouhuai Xu, Zhimin Gao, Yang Lu, Weidong Shi, and Nolan Shah
Spanning Properties of Theta-Theta-6, Mirela Damian, John Iacono, and Andrew Winslow
Hardness of Sparse Sets and Minimal Circuit Size Problem, Bin Fu
Polyhedra Circuits and Their Applications, Bin Fu, Pengfei Gu, and Yuming Zhao
Visual Attention Consistency under Image Transforms for Multi-Label Image Classification, Hao Guo, Kang Zheng, Xiaochuan Fan, Hongkai Yu, and Song Wang
Domain Adaptation For Vehicle Detection In Traffic Surveillance Images From Daytime To Nighttime, Jinlong Ji, Zhigang Xu, Hongkai Yu, Lan Fu, and Xuesong Zhou
Infusing Raspberry Pi in the Computer Science Curriculum for Enhanced Learning, Fitratullah Khan, Mahmoud K. Quweider, Ala Qubbaj, Emmett Tomai, Lei Xu, Liyu Zhang, and Hansheng Lei
Analyzing Sensor-Based Individual and Population Behavior Patterns via Inverse Reinforcement Learning, Beiyu Lin and Diane J. Cook
Using continuous sensor data to formalize a model of in-home activity patterns, Beiyu Lin, Diane J. Cook, and Maureen Schmitter-Edgecombe
An approximation algorithm for the l-pseudoforest deletion problem, Mugang Lin, Qilong Feng, Bin Fu, and Jianxin Wang
Swarm Foraging Review: Closing the Gap Between Proof and Practice, Qi Lu, G. Matthew Fricke, John C. Ericksen, and Melanie E. Moses
A Bio-Inspired Transportation Network for Scalable Swarm Foraging, Qi Lu, G. Matthew Fricke, Takaya Tsuno, and Melanie E. Moses
Different Approximation Algorithms for Channel Scheduling in Wireless Networks, Qiufen Ni, Chuanhe Huang, Panos M. Pardalos, Jia Ye, and Bin Fu
Real-Time Road Hazard Information System, Carlos Pena-Caballero, Dong-Chul Kim, Adolfo Gonzalez, Osvaldo Castellanos, Angel A. Cantu, and Jungseok Ho
MCRA: Multicost Rerouting Algorithm in SDN, Kuangyu Qin, Bin Fu, Peng Chen, and Jianhua Huang
Cybersecurity, Digital Forensics, and Mobile Computing: Building the Pipeline of Next-generation University Graduates through Focused High School Summer Camps, Mahmoud K. Quweider, Fitratullah Khan, Liyu Zhang, Lei Xu, Yessica Rodriguez, and Yessenia Rodriguez
Short-Term Traffic Speed Prediction via Machine Learning, Luis Romo, Jingru Zhang, Kevin Eastin, and Chao Xue
Detecting phone-related pedestrian distracted behaviours via a two-branch convolutional neural network, Humberto Saenz, Huiming Sun, Lingtao Wu, Xuesong Zhou, and Hongkai Yu
Multi-Spectral Salient Object Detection by Adversarial Domain Adaptation, Shaoyue Song, Hongkai Yu, Zhenjiang Miao, Jianwu Fang, Kang Zheng, Cong Ma, and Song Wang
The Majority Rule: A General Protection on Recommender System, Lei Xu, Lin Chen, Martin Flores, Hansheng Lei, Liyu Zhang, Mahmoud K. Quweider, Fitratullah Khan, and Weidong Shi
Supporting Blockchain-Based Cryptocurrency Mobile Payment With Smart Devices, Lei Xu, Lin Chen, Zhimin Gao, Larry Carranco, Xinxin Fan, and Nolah Shah
DIoTA: Decentralized Ledger based Framework for Data Authenticity Protection in IoT Systems, Lei Xu, Lin Chen, Zhimin Gao, Xinxin Fan, Taeweon Suh, and Weidong Shi
PrivateEx: Privacy Preserving Exchange of Crypto-assets on Blockchain, Lei Xu, Lin Chen, Zhimin Gao, Keshav Kasichainula, Miguel Fernandez, Bogdan Carbunar, and Weidong Shi
FPGA based Blockchain System for Industrial IoT, Lei Xu, Lin Chen, Zhimin Gao, Hanyee Kim, Taeweon Suh, and Weidong Shi
Blockchain based End-to-end Tracking System for Distributed IoT Intelligence Application Security Enhancement, Lei Xu, Zhimin Gao, Xinxin Fan, Lin Chen, Hanyee Kim, Taeweon Suh, and Weidong Shi
Human Face Sketch to RGB Image with Edge Optimization and Generative Adversarial Networks, Feng Zhang, Huihuang Zhao, Wang Ying, Qingyun Liu, Alex Noel Joseph Raj, and Bin Fu
Weak mitoticity of bounded disjunctive and conjunctive truth-table autoreducible sets, Liyu Zhang, Mahmoud K. Quweider, Hangsheng Lei, and Fitratullah Khan
Fusion of 3D LIDAR and Camera Data for Object Detection in Autonomous Vehicle Applications, Xiangmo Zhao, Pengpeng Sun, Zhigang Xu, Haigen Min, and Hongkai Yu
Submissions from 2019
CoPhosK: A method for comprehensive kinase substrate annotation using co-phosphorylation analysis, Marzieh Ayati, Danica Wiredja, Daniela Schlatzer, Sean Maxwell, Ming Li, Mehmet Koyutürk, and Mark R. Chance
Full Tilt: Universal Constructors for General Shapes with Uniform External Forces, Jose Balanza-Martinez, Austin Luchsinger, David Caballero, Rene Reyes, Angel A. Cantu, Robert Schweller, Luis Angel Garcia, and Tim Wylie
Optimal staged self-assembly of linear assemblies, Cameron Chalk, Eric M. Martinez, Robert Schweller, Luis Vega, Andrew Winslow, and Tim Wylie
SafeDB: Spark Acceleration on FPGA Clouds with Enclaved Data Processing and Bitstream Protection, Han-Yee Kim, Rohyoung Myung, Boeui Hong, Heonchang Yu, Taeweon Suh, Lei Xu, and Weidong Shi
Randomized Parameterized Algorithms for the Kidney Exchange Problem, Mugang Lin, Jianxin Wang, Qilong Feng, and Bin Fu
ELF3 is an antagonist of oncogenic-signalling-induced expression of EMT-TF ZEB1, D Liu, Y Skomorovska, J Song, E Bowler, R Harris, R Ravasz, S Bai, Marzieh Ayati, K Tamai, and Mehmet Koyuturk
Self-assembly of shapes at constant scale using repulsive forces, Austin Luchsinger, Robert Schweller, and Tim Wylie
A Novel Method for Intelligent Single Fault Detection of Bearings Using SAE and Improved D–S Evidence Theory, Jianguang Lu, Huan Zhang, and Xianghong Tang
Comparing Physical and Simulated Performance of a Deterministic and a Bio-inspired Stochastic Foraging Strategy for Robot Swarms, Qi Lu, Antonio D. Griego, G. Matthew Fricke, and Melanie E. Moses
An Accelerated Hierarchical Approach for Object Shape Extraction and Recognition, Mahmoud K. Quweider, Bassam Arshad, Hansheng Lei, Liyu Zhang, and Fitratullah Khan
A Holistic Approach for Enhancing Distributed Education with Multi-Campus Course Delivery Methods, Mahmoud K. Quweider, Ala Qubbaj, Liyu Zhang, Fitratullah Khan, and Hansheng Lei
Nearly Constant Tile Complexity for any Shape in Two-Handed Tile Assembly, Robert Schweller, Andrew Winslow, and Tim Wylie
Verification in staged tile self-assembly, Robert Schweller, Andrew Winslow, and Tim Wylie
Crazy sequential representations of numbers for small bases, Tim Wylie
KCRS: A Blockchain-Based Key Compromise Resilient Signature System, Lei Xu, Lin Chen, Zhimin Gao, Xinxin Fan, Kimberly Doan, Shouhuai Xu, and Weidong Shi
Blockchain based Access Control for Enterprise Blockchain Applications, Lei Xu, Isaac Markus, Subhod I, and Nikhil Nayab
Submissions from 2018
Optimal Staged Self-Assembly of General Shapes, Cameron Chalk, Eric M. Martinez, Robert Schweller, Luis Vega, Andrew Winslow, and Tim Wylie
Approximate Set Union via Approximate Randomization, Bin Fu, Pengfei Gu, and Yuming Zhao
A model for donation verification, Bin Fu, Fengjuan Zhu, and John P. Abraham
A Multiple Radar Approach for Automatic Target Recognition of Aircraft using Inverse Synthetic Aperture Radar, Carlos Pena-Caballero, Elifaleth Cantu, Jesus Rodriguez, Adolfo Gonzales, Osvaldo Castellanos, Angel Cantu, Megan K. Strait, Jae Son, and Dong-Chul Kim
EDDA: An Efficient Distributed Data Replication Algorithm in VANETs, Junyu Zhu, Chuanhe Huang, Xiying Fan, Sipei Guo, and Bin Fu
Submissions from 2017
Stable solution to l 2,1-based robust inductive matrix completion and its application in linking long noncoding RNAs to human diseases, Ashis Kumer Biswas, Dong-Chul Kim, Mingon Kang, Chris Ding, and Jean X. Gao
Universal Shape Replicators via Self-Assembly with Attractive and Repulsive Forces, Cameron Chalk, Erik D. Demaine, Martin L. Demaine, Eric Martinez, Robert Schweller, Luis Vega, and Tim Wylie
Concentration independent random number generation in tile self-assembly, Cameron T. Chalk, Bin Fu, Eric M. Martinez, Robert Schweller, and Tim Wylie
Analyzing the Relationship between Human Behavior and Indoor Air Quality, Beiyu Lin, Yibo Huangfu, Nathan Lima, Bertram Jobson, Max Kirk, Patrick O’Keeffe, Shelley N. Pressley, Von Walden, Brian Lamb, and Diane J. Cook
The Public’s Perception of Humanlike Robots: Online Social Commentary Reflects an Appearance-Based Uncanny Valley, a General Fear of a “Technology Takeover”, and the Unabashed Sexualization of Female-Gendered Robots, Megan K. Strait, Cynthia Aguillon, Virginia Contreras, and Noemi Garcia
Understanding the Uncanny: Both Atypical Features and Category Ambiguity Provoke Aversion toward Humanlike Robots, Megan K. Strait, Victoria A. Floerke, Wendy Ju, Keith Maddox, Jessica D. Remedios, Malte F. Jung, and Heather L. Urry
Phosphoproteomics Profiling of Nonsmall Cell Lung Cancer Cells Treated with a Novel Phosphatase Activator, Danica Wiredja, Marzieh Ayati, Sahar Mazhar, Jaya Sangodkar, Sean Maxwell, Daniela Schlatzer, Goutham Narla, Mehmet Koyutürk, and Mark R. Chance
Submissions from 2016
Handcrafted Microwire Regenerative Peripheral Nerve Interfaces with Wireless Neural Recording and Stimulation Capabilities, Ali Ajam, Ridwan Hossain, Nishat Tasnim, Luis Castanuela, Raul Ramos, Dong-Chul Kim, and Yoonsu Choi
Genetic variants in KCNJ11, TCF7L2 and HNF4A are associated with type 2 diabetes, BMI and dyslipidemia in families of Northeastern Mexico: A pilot study, Hugo Leonid Gallardo-Blanco, Jesus Zacarias Villarreal-Perez, Ricardo Martin Cerda-Flores, and Andres Figueroa
Inferring causal molecular networks: empirical assessment through a community-based effort, Steven M. Hill, Laura M. Heiser, Thomas Cokelaer, Michael Unger, Nicole K. Nesser, Daniel E. Carlin, Yang Zhang, Artem Sokolov, Evan O. Paull, and Dong-Chul Kim
Integrative approach for inference of gene regulatory networks using lasso-based random featuring and application to psychiatric disorders, Dongchul Kim, Mingon Kang, Ashis Kumer Biswas, Chunyu Liu, and Jean Gao
Exploring factors that explain possible needs of mobile devices integrated in elearning through learning profiling, Cheng-Chang Pan, Stephen Sivo, and Francisco Garcia
Submissions from 2015
Universal Computation with Arbitrary Polyomino Tiles in Non-Cooperative Self-Assembly, Sándor P. Fekete, Jacob Hendricks, Matthew J. Patitz, and Trent A. Rogers
Multiblock Discriminant Analysis for Integrative Genomic Study, Mingon Kang, Dong-Chul Kim, Chunyu Liu, and Jean Gao
Submissions from 2014
On the Approximability of the Exemplar Adjacency Number Problem for Genomes with Gene Repetitions, Zhinxiag Chen, Bin Fu, Randy Goebel, Guohui Lin, Weitian Tong, Jinhui Xu, Boting Yang, Zhiyu Zhao, and Binhai Zhu
Exponential Replication of Patterns in the Signal Tile Assembly Model, Alexandra Keenan, Robert Schweller, and Xingsi Zhong
Inference of SNP-Gene Regulatory Networks by Integrating Gene Expressions and Genetic Perturbations, Dongchul Kim, Jiao Wang, Chunyu Liu, and Jean Gao
What we can and cannot (yet) do with functional near infrared spectroscopy, Megan K. Strait and Matthias Scheutz
Adapting In-Game Agent Behavior by Observation of Players Using Learning Behavior Trees, Emmett Tomai and Roberto Flores
Submissions from 2013
Fuel Efficient Computation in Passive Self-Assembly, Robert Schweller and Michael Sherman
Submissions from 2012
Improving STEM Education in Research: Preliminary Report on the Development of a Computer-Assisted Student-Mentor Research Community, David A. Rios, Artem Chebotko, Christine Reilly, Ralph Carlson, Emmett Tomai, Amy A. Weimer, Nicholas Weimer, Thomas Pearson, Francis Andoh-Baidoo, Robert Winkle, David Ammons, and Joanne Rampersad-Ammons
Submissions from 2011
Temperature 1 Self-Assembly: Deterministic Assembly in 3D and Probabilistic Assembly in 2D, Matthew Cook, Yunhui Fu, and Robert Schweller
Separating NE from Some Nonuniform Nondeterministic Complexity Classes, Bin Fu, Ansheng Li, and Liyu Zhang
Proof System Representations of Degrees of Disjoint NP-Pairs, Liyu Zhang
Submissions from 2010
Shape Replication through Self-Assembly and RNase Enzymes, Zachary Abel, Nadia Benbernou, Mirela Damian, Erik D. Demaine, Martin L. Demaine, Robin Flatland, Scott D. Kominers, and Robert Schweller
A quadratic lower bound for Rocchio’s similarity-based relevance feedback algorithm with a fixed query updating factor, Zhixiang Chen, Bin Fu, and John P. Abraham
